Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929647.1_cds_XP_016476935.1_68717
CDS Infomation

[gene=LOC107798446] [db_xref=GeneID:107798446] [protein=sorting nexin 2B-like isoform X2] [protein_id=XP_016476935.1] [location=join(62313..63305,63668..63877,64100..64360,69138..69224,71512..71586)] [gbkey=CDS]
Sequence

ATGATGGGATACGAGAATCAGAGTTACGAAGAGTCTCATCTATATGCATCCAAAGAGGAG
ATGGAATCACTAGTCCTCAACGACGATTCATCCAACGGCGCTCATTCATTCTCCGATCCA
CTTTCCGCCTCATCTCTGCCGTTCGCTGAAATTCCCGCTGAGCAAAGTCAAACCCCTAAT
TCATTCAATTCCATCCTTGAACCTCCTTCTTATGCGGAGGCTATTTTCAGATCCTTTGAT
GCTGATCAATCTCCTACTGAAATCAACGGTCACGATCACTCTATTGTTTCGCCTTCCTCA
TCTCCGTCATCATCCTCGGAATTCCTGAGACTCAGCGTTTCGGATCCACTGAAAGAGCAA
GAGCTGACGAATTCGCTCGTTCCAGGGGGGTCGAATTATGTTACTTACCTAATTACTACG
AGGACGAACTTACCTGACTTCGATGGAACTGAATTCAGCGTTCGGAGGAGATTTAGAGAC
GTGGTGACTTTATCGGACCGGTTGGCGGAGTCGTATAGAGGTTTTTTCATTCCGTTAAGG
CCGGACAAGAGTGTAGTTGAGAGTCAGGTGATGCAGAAACAGGAGTTTTTGGAACAGAGG
AGAGCAGCACTGGAGAAGTACCTGAGGAGATTAGCTGCGCATCCGGTAATTCGGCGGAGC
GAGGAGCTGAGGATGTTTCTGGAGGCGAATGGGAAGCTGCCGCTGGTGAGGACCACGGAT
GTGGCGTCAAGGATGTTGGATGGGGCAGTGAAGTTACCGAAACAGATGTTTAGCGCCGAG
ACAGTAGGAGGGGGAATGGTGGATGTGAATGAGGTGGCTCAGCCTGCCAAAGGAGGTAGG
GACTTATTGAGAATCTTTAAGGAGTTGAAGCAATCTGTGACTTATGATTGGGGTGGTGTG
AAGCCCCAAGTAGTAGAGGAGGACAAGGAGTTACTGGAAAAGAAGGAGAAATTGCAGGAT
TTTGAGCAGCAGCTCAGCAATGTGTCTCAGCAGGCTGAAGCACTCGTAAAAGCTCAGCAG
GATATTGGAGAAACCATGGGGCAAATGGGCCTAGCTTTCGTCAAGTTGACAAAGTTTGAG
ACAGAGCAAGCAGTTTATGATTCACAAAGAACAAGGGCTGCAGATATGAAGAATGTCGCA
ACTGCTGCTGTTAAGGCGAGCAGGCTATATAGGGAGCTAAATGCACAAACTGTCAAACAT
TTGGATAAGCTCCATGAATACCTTGGAGTGATGTTAGCTGTGAACAATGCATTTTCGGAT
AGGTCAAGTGCTCTTTTGACTGTACAGACACTGTTGTCAGAGCTGTCATCACTGAATTCA
AGGATTGAAAAACTTGAAGCTGCTTCATCTAAGATATTTGGTGGGGACAGGTCTAGAATT
CGTAAAATAGAAGAGCTCAAAGAAACTCTTAGAGTTACTGAAGATGCCAAAAGTTCTGCT
GTGAGCGAGTATGAGCGGATCAAGGAAAACAACAAGAATGAGCTTGAGAGATTTGAGAAG
GAAAGGCATGATGACTTCTTGGGAATGTTGAGAGGATTTATTGTCAATCAGGACTTGAAA
CGTGATATTAGCAAGCCACTTGAACTTTCTTGTGACAAGGTAGAATCTTTGGTCGGGCAT
ACATGA

Peptide Sequence

PEP ID

XP_016476935.1
PEP Infomation

PREDICTED: sorting nexin 2B-like isoform X2 [Nicotiana tabacum]
Sequence

MMGYENQSYEESHLYASKEEMESLVLNDDSSNGAHSFSDPLSASSLPFAEIPAEQSQTPN
SFNSILEPPSYAEAIFRSFDADQSPTEINGHDHSIVSPSSSPSSSSEFLRLSVSDPLKEQ
ELTNSLVPGGSNYVTYLITTRTNLPDFDGTEFSVRRRFRDVVTLSDRLAESYRGFFIPLR
PDKSVVESQVMQKQEFLEQRRAALEKYLRRLAAHPVIRRSEELRMFLEANGKLPLVRTTD
VASRMLDGAVKLPKQMFSAETVGGGMVDVNEVAQPAKGGRDLLRIFKELKQSVTYDWGGV
KPQVVEEDKELLEKKEKLQDFEQQLSNVSQQAEALVKAQQDIGETMGQMGLAFVKLTKFE
TEQAVYDSQRTRAADMKNVATAAVKASRLYRELNAQTVKHLDKLHEYLGVMLAVNNAFSD
RSSALLTVQTLLSELSSLNSRIEKLEAASSKIFGGDRSRIRKIEELKETLRVTEDAKSSA
VSEYERIKENNKNELERFEKERHDDFLGMLRGFIVNQDLKRDISKPLELSCDKVESLVGH
T

Transcript Sequence

Gene sequence data has not been registered.